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bioRxiv · Neuroscience· Lopes Alho, E. J., Friedrich, H., Alho, A. T. D. L., Alaminos Bouza, A., Amaro, E., Grinberg, L. T., Oxenford, S., Talamoni Fonoff, E., Horn, A., Heinsen, H. ·· 9 天前精选AI 评分60

SWAN图谱:整合神经影像与高分辨率组织学的人脑立体定向空间开放多模态资源

The SWAN atlas: an open multimodal resource combining neuroimaging and high-resolution histology of the human brain in stereotactic space

AI 导读

依据bioRxiv预印本摘要,研究团队用高厚度切片切分一整例人脑,将组织学切片配准到该脑自身MRI,再经多步变换归一化到标准立体定向空间,形成SWAN图谱。用户可通过MRI-to-MRI配准把图谱变换到患者空间或反向变换,并用SwanWarp或WarpDrive做进一步非线性精修。

推荐理由

该预印本描述了一个将全脑高厚度切片组织学与自身MRI配准并归一化到立体定向空间的开放图谱资源,对需要组织学与在体影像对应关系的立体定向神经外科与群体影像研究有方法参考价值;但分割与软件尚在准备开放,且未经同行评审。

摘要

Precise localization of human brain regions is critical in clinical practice and population neuroimaging, particularly in stereotactic functional neurosurgery, where small targeting errors may lead to treatment failure. Although MRI provides in vivo and postmortem brain parcellation, histology offers complementary mesoscopic and microscopic information. A major limitation of histological atlases for clinical use is accurate coregistration with in vivo imaging, since tissue processing introduces deformation. To reduce this problem, we sectioned an entire human brain using high-thickness slices, which are less prone to slice-level deformation. Histological sections were registered to the brain's own MRI and normalized to standard stereotactic space through a multistep transform chain. Users can apply MRI-to-MRI registration to transform the atlas into patient space and vice versa, with further nonlinear refinement using SwanWarp or WarpDrive tools. Segmentations and software are being prepared for open distribution. This resource may empower both clinical neurosurgical research and the broader neuroimaging field at large.

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来源:bioRxiv · Neuroscience · biorxiv.org